STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (764 aa)    
Predicted Functional Partners:
YTM1
Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.999
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.999
SBOR_6989
RNA helicase.
   
 0.998
SBOR_5674
Putative Nuclear GTP-binding protein NUG1.
   
 0.998
SBOR_0944
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 0.997
SBOR_9534
Putative ribosomal RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 0.996
SBOR_9663
Brix domain-containing protein 2.
   
 0.995
SBOR_8845
Putative rRNA-processing protein EBP2.
   
 0.995
SBOR_7339
60S ribosomal protein L7.
   
 0.995
SBOR_4648
Ribosome assembly protein Noc2.
   
 
 0.995
Your Current Organism:
Sclerotinia borealis
NCBI taxonomy Id: 1432307
Other names: S. borealis F-4128, Sclerotinia borealis F-4128
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