STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SBOR_1192DNA_MISMATCH_REPAIR_2 domain-containing protein. (874 aa)    
Predicted Functional Partners:
SBOR_7974
DNA mismatch repair protein Msh6.
  
0.996
SBOR_9482
DNA_mis_repair domain-containing protein.
 
 0.915
SBOR_1925
Putative DNA mismatch repair protein Mlh1.
 
 0.910
SBOR_9716
MutL_C domain-containing protein.
  
 0.883
SBOR_0539
Uncharacterized protein.
  
 0.881
SBOR_7838
Uncharacterized protein.
  
 0.836
SBOR_2806
Uncharacterized protein.
   
 0.827
SBOR_1963
DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family.
    
 0.805
SBOR_6255
Vezatin domain-containing protein.
   
 0.783
SBOR_1324
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.783
Your Current Organism:
Sclerotinia borealis
NCBI taxonomy Id: 1432307
Other names: S. borealis F-4128, Sclerotinia borealis F-4128
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.