STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_0569Putative mobilization protein; Similar to BF0133. (670 aa)    
Predicted Functional Partners:
BN938_0568
Putative conjugative transposon mobilization protein BF0132.
   
 0.932
BN938_0376
Conjugative transposon protein TraG.
 
  
 0.792
BN938_0559
Conjugative transposon protein TraG.
 
  
 0.792
BN938_0371
Conjugative transposon protein TraJ.
 
     0.777
BN938_0378
Conjugative transposon protein TraE.
 
     0.777
BN938_0551
Conjugative transposon protein TraJ.
 
     0.777
BN938_0561
Conjugative transposon protein TraE.
 
     0.777
BN938_2433
Conjugative transposon protein TraJ.
 
     0.777
BN938_0370
Conjugative transposon protein TraK.
 
    0.776
BN938_0550
Conjugative transposon protein TraK.
 
    0.776
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.