STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_0867Sensor histidine kinase. (387 aa)    
Predicted Functional Partners:
BN938_1265
Response regulator.
 
 
 0.807
BN938_1147
Two-component system response regulator.
 
 
 0.781
BN938_2252
Phosphate regulon transcriptional regulatory protein PhoB (SphR).
 
 
 0.765
BN938_0053
Hypothetical protein.
  
 
 0.670
BN938_2894
Hypothetical protein.
  
     0.623
BN938_0866
Na+/H+ antiporter NhaD type.
  
    0.587
BN938_1642
Hypothetical protein.
 
 
 
 0.586
BN938_1346
Putative membrane transport protein.
  
    0.571
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
 
 
 
 0.501
BN938_0868
Thioredoxin reductase.
  
  
 0.495
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.