STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_1307ABC transporter permease protein. (395 aa)    
Predicted Functional Partners:
lolD
Lipoprotein releasing system ATP-binding protein LolD; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 0.956
BN938_0063
Lipoprotein releasing system transmembrane protein LolC.
  
  
 
0.929
BN938_0958
ABC transporter ATP-binding protein.
  
 
 0.793
BN938_2978
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.793
BN938_1308
UDP-N-acetylmuramate--alanine ligase; Cell wall formation; Belongs to the MurCDEF family.
  
    0.779
BN938_1309
Hypothetical protein.
       0.773
BN938_2080
Outer membrane protein assembly factor YaeT precursor.
 
   
 0.731
BN938_2107
Hypothetical protein.
  
     0.659
BN938_1310
Hypothetical protein.
       0.613
BN938_1232
Signal peptidase I; Belongs to the peptidase S26 family.
  
  
 0.603
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.