STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_1520TPR domain protein. (449 aa)    
Predicted Functional Partners:
BN938_1519
Putative outer membrane protein.
 
     0.859
BN938_2046
Hypothetical protein.
 
    0.787
BN938_0849
Hypothetical protein.
  
 
   0.779
BN938_1613
Biopolymer transport exbD protein.
  
   
 0.774
BN938_1614
Hypothetical protein.
  
   
 0.774
BN938_2888
Hypothetical protein.
  
     0.774
BN938_1611
MotA/TolQ/ExbB proton channel family protein.
  
     0.747
BN938_1521
Hypothetical protein.
 
     0.691
BN938_1468
Hypothetical protein.
  
     0.680
BN938_2818
Hypothetical protein.
  
     0.680
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.