STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_2778Membrane protein associated with methylmalonyl-CoA decarboxylase. (317 aa)    
Predicted Functional Partners:
BN938_2134
Hypothetical protein.
  
     0.687
BN938_2790
Putative oxalate:formate antiporter.
 
     0.682
BN938_2883
Hypothetical protein.
  
     0.679
BN938_2232
V-type ATP synthase subunit C.
  
    0.635
BN938_1377
Immunoreactive 53 kDa antigen PG123.
  
     0.615
BN938_2780
Methylmalonyl-CoA decarboxylase, beta chain.
 
    0.608
BN938_0217
Outer membrane assembly protein.
  
     0.607
BN938_2777
Methylmalonyl-CoA decarboxylase, alpha chain.
  
    0.597
BN938_1620
Hypothetical protein.
  
     0.585
BN938_2779
Biotin carboxyl carrier protein of methylmalonyl-CoA decarboxylase.
  
    0.577
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.