STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_2790Putative oxalate:formate antiporter. (447 aa)    
Predicted Functional Partners:
BN938_2788
Hypothetical protein.
       0.737
BN938_2789
tRNA (guanosine(18)-2'-O)-methyltransferase.
       0.737
BN938_2778
Membrane protein associated with methylmalonyl-CoA decarboxylase.
 
     0.682
BN938_2791
TPR repeat.
 
     0.674
BN938_2344
Putative dipeptidase.
  
     0.660
BN938_2792
Putative DNA mismatch repair protein.
 
     0.621
BN938_2957
Di-/tripeptide transporter.
 
  
 0.564
BN938_1377
Immunoreactive 53 kDa antigen PG123.
  
     0.539
BN938_0523
Phage major capsid protein.
   
    0.497
BN938_2213
Putative secreted peptidase.
  
     0.492
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.