STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN938_2994TPR domain protein. (232 aa)    
Predicted Functional Partners:
BN938_1352
Protein in cluster with ribosomal protein L32p; Bacteroidetes/Chlorobi subfamily.
  
    0.809
BN938_2864
Hypothetical protein.
 
  
 0.780
BN938_2760
Hypothetical protein.
  
    0.776
BN938_0851
Hypothetical protein.
 
   
 0.775
BN938_1395
Peptidyl-prolyl cis-trans isomerase.
  
  
 0.771
BN938_0950
Cell division protein FtsQ.
  
   
 0.767
BN938_2203
Hypothetical protein.
  
     0.765
BN938_1904
Hypothetical protein.
 
   
 0.756
BN938_2847
Hypothetical protein.
  
     0.735
BN938_0982
Organic solvent tolerance protein precursor.
 
   
 0.728
Your Current Organism:
Mucinivorans hirudinis
NCBI taxonomy Id: 1433126
Other names: ATCC BAA-2553, DSM 27344, M. hirudinis, Mucinivorans hirudinis Nelson et al. 2015, Rikenellaceae bacterium M3, Rikenellaceae bacterium M4, Rikenellaceae bacterium M6, strain M3
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.