STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB24988.1Iron-sulfur cluster binding protein. (172 aa)    
Predicted Functional Partners:
AKB24646.1
Formate dehydrogenase alpha subunit.
 
 
 0.999
AKB24987.1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
 
 0.975
AKB25893.1
Methanophenazine hydrogenase cytochrome b subunit.
  
 
 0.923
AKB25898.1
Methanophenazine hydrogenase cytochrome b subunit.
  
 
 0.923
AKB25405.1
Tungsten-containing aldehyde:ferredoxin oxidoreductase.
 
 
 0.894
AKB23914.1
Aldehyde ferredoxin oxidoreductase.
 
 
 0.893
AKB23743.1
Hydrogenase, group 4, HycE subunit, putative.
  
  
 0.820
AKB24182.1
Glutamate synthase [NADPH] small chain.
     
 0.762
AKB23712.1
Iron-sulfur-binding protein.
 
  
 0.734
AKB25104.1
Putative restriction endonuclease.
   
    0.719
Your Current Organism:
Methanosarcina sp. MTP4
NCBI taxonomy Id: 1434100
Other names: M. sp. MTP4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.