STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB19607.1Two component system histidine kinase. (72 aa)    
Predicted Functional Partners:
AKB20257.1
Two-component response regulator.
 
 
 0.842
AKB20256.1
Methyl-accepting chemotaxis protein.
  
 
 0.777
AKB20255.1
Positive regulator of CheA protein activity (CheW).
 
 
 0.711
AKB18857.1
Hypothetical protein.
 
 
 
 0.661
AKB18102.1
Sensory transduction histidine kinase.
 
 
 
 0.637
AKB18009.1
Sensory transduction histidine kinase.
 
 
 
 0.630
AKB19859.1
Hypothetical protein.
 
 
 
 0.624
AKB17960.1
Sensory transduction histidine kinase.
 
 
 
 0.617
AKB19347.1
Sensory transduction histidine kinase.
 
 
 
 0.614
AKB19346.1
Sensory transduction histidine kinase.
 
 
 
 0.613
Your Current Organism:
Methanosarcina sp. WWM596
NCBI taxonomy Id: 1434103
Other names: M. sp. WWM596
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.