STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB76794.15-amino-6-(5-phosphoribosylamino)uracil reductase. (223 aa)    
Predicted Functional Partners:
AKB77057.1
5-amino-6-(5-phosphoribosylamino)uracil reductase.
     
  0.900
AKB76796.1
ABC-type Na+ efflux pump, permease component.
       0.543
AKB76795.1
ABC transporter, ATP-binding protein.
       0.536
AKB78552.1
Hypothetical protein.
  
     0.511
AKB76793.1
Hypothetical protein.
       0.508
AKB77405.1
Hypothetical protein.
  
     0.474
AKB78969.1
Hypothetical protein.
  
     0.455
AKB77697.1
Hypothetical protein.
  
     0.437
Your Current Organism:
Methanosarcina horonobensis
NCBI taxonomy Id: 1434110
Other names: M. horonobensis HB-1 = JCM 15518, Methanosarcina horonobensis HB-1, Methanosarcina horonobensis HB-1 = JCM 15518, Methanosarcina horonobensis JCM 15518, Methanosarcina horonobensis JCM 15518 = HB-1, Methanosarcina sp. HB-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.