STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB74871.14-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (455 aa)    
Predicted Functional Partners:
mfnA
L-tyrosine decarboxylase; Catalyzes the decarboxylation of L-tyrosine to produce tyramine for methanofuran biosynthesis. Can also catalyze the decarboxylation of L-aspartate to produce beta-alanine for coenzyme A (CoA) biosynthesis; Belongs to the group II decarboxylase family. MfnA subfamily.
  
 0.966
AKB73935.1
Succinate-semialdehyde dehydrogenase [NADP+].
 0.960
AKB74029.1
Phosphopantothenate synthetase, archaeal.
     
  0.900
AKB74870.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 0.811
argC
N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.
 
  
 0.698
AKB75929.1
Aldehyde dehydrogenase.
 
 0.630
AKB75212.1
Amino acid permease.
 
  
 0.604
AKB75159.1
Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family.
  
 0.603
AKB76449.1
Aspartokinase; Belongs to the aspartokinase family.
     
 0.591
AKB73823.1
Agmatinase; Belongs to the arginase family.
 
  
 0.551
Your Current Organism:
Methanosarcina lacustris
NCBI taxonomy Id: 1434111
Other names: M. lacustris Z-7289, Methanosarcina lacustris Z-7289
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