STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB37931.1Cell surface protein. (512 aa)    
Predicted Functional Partners:
AKB37317.1
Cell surface protein.
 
   
 0.716
AKB37060.1
Phospholipid-binding protein.
 
 
 0.715
AKB35935.1
Peptidyl-prolyl cis-trans isomerase.
  
 
 0.707
AKB34823.1
Citrate synthase (si).
    
 
 0.685
AKB38634.1
GTP-binding protein RBG1/RBG2.
    
   0.670
AKB37736.1
Cell surface protein.
  
 
 0.566
AKB34913.1
Cell surface protein.
     0.548
AKB35110.1
Cell surface protein.
 
 
 0.540
AKB37502.1
Serine protease inhibitor (serpin family); Belongs to the serpin family.
  
 0.511
AKB36078.1
Hypothetical protein.
 
     0.508
Your Current Organism:
Methanosarcina siciliae
NCBI taxonomy Id: 1434118
Other names: M. siciliae C2J, Methanosarcina siciliae C2J
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.