STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB42414.1Glycosyltransferase. (394 aa)    
Predicted Functional Partners:
AKB42568.1
Hydrolase of the alpha/beta superfamily.
   
 
 0.664
AKB44443.1
Alpha/beta hydrolase.
   
 
 0.664
AKB45744.1
Alpha/beta superfamily.
   
 
 0.664
AKB44923.1
1,4-alpha-glucan branching enzyme.
  
 0.646
AKB42964.1
Glycosyl transferase, group 1.
  
     0.633
AKB42371.1
ATP-dependent DNA helicase RecQ.
   
 
 0.618
AKB42413.1
Glycosyltransferase.
 
    
0.599
AKB42421.1
UDP-glucose dehydrogenase.
 
  
 0.560
AKB42397.1
UDP-glucose 4-epimerase.
 
  
 0.484
AKB42402.1
UDP-glucose dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
  
 0.474
Your Current Organism:
Methanosarcina vacuolata
NCBI taxonomy Id: 1434123
Other names: M. vacuolata Z-761, Methanosarcina vacuolata Z-761
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.