STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSM06744.1Putative plasmid stabilization system; Identified by sequence similarity; putative. (102 aa)    
Predicted Functional Partners:
OSM06745.1
Putative helix-turn-helix domain-containing protein; Identified by sequence similarity; putative.
 
   
 0.940
OSM07028.1
Putative helix-turn-helix domain-containing protein; Identified by sequence similarity; putative.
   
 
 0.866
yefM
Putative antitoxin of the YoeB-YefM toxin-antitoxin system; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.788
OSM00071.1
Putative prevent-host-death protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.788
OSM06196.1
Putative Phage-related transcriptional regulator; Identified by sequence similarity; putative.
 
   
 0.715
OSM06747.1
Hypothetical protein.
       0.431
OSM06746.1
Putative protein of unknown function DUF955; Identified by sequence similarity; putative.
       0.431
xerD-2
Putative tyrosine recombinase; Identified by sequence similarity; putative.
       0.430
Your Current Organism:
Magnetofaba australis
NCBI taxonomy Id: 1434232
Other names: M. australis IT-1, Magnetococcaceae bacterium IT-1, Magnetofaba australis IT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.