STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSM01739.1Putative hemolysin-type calcium-binding region; Identified by sequence similarity; putative. (942 aa)    
Predicted Functional Partners:
OSM00417.1
Identified by sequence similarity; putative.
 
 
 0.918
OSM01721.1
Putative ABC transporter; Identified by sequence similarity; putative.
 
  
 0.836
OSM01779.1
Putative ABC transporter; Identified by sequence similarity; putative.
 
  
 0.827
OSM01778.1
Putative lantibiotic ABC transporter; Identified by sequence similarity; putative.
 
  
 0.801
OSM01824.1
Putative ABC transporter; Identified by sequence similarity; putative.
 
  
 0.796
OSM04791.1
Hypothetical protein.
 
 0.748
OSM01720.1
Putative HlyD family type I secretion membrane fusion protein; Identified by sequence similarity; putative.
 
  
 0.733
OSM01777.1
Putative HlyD family type I secretion membrane fusion protein; Identified by sequence similarity; putative.
 
  
 0.731
OSM01823.1
Putative HlyD family type I secretion membrane fusion protein; Identified by sequence similarity; putative.
 
  
 0.678
OSM02207.1
Putative TonB-dependent copper receptor; Identified by sequence similarity; putative.
    
 
 0.676
Your Current Organism:
Magnetofaba australis
NCBI taxonomy Id: 1434232
Other names: M. australis IT-1, Magnetococcaceae bacterium IT-1, Magnetofaba australis IT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.