STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OSM01576.1Putative penicillin-binding protein 1C; Identified by sequence similarity; putative. (719 aa)    
Predicted Functional Partners:
OSM01578.1
Putative Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal 2; Identified by sequence similarity; putative.
 
   
 0.836
OSM04814.1
Putative 1A family penicillin-binding protein; Identified by sequence similarity; putative.
  
  
0.689
pbpC
Putative penicillin-binding protein; Identified by sequence similarity; putative.
  
  
0.678
OSM01577.1
Hypothetical protein.
       0.564
OSM03991.1
Putative glycosyl transferase family protein; Identified by sequence similarity; putative.
  
  
 0.542
OSM02564.1
Identified by sequence similarity; putative.
  
  
  0.519
OSM00115.1
Putative FMN-dependent alpha-hydroxy acid dehydrogenase; Identified by sequence similarity; putative.
 
  
  0.487
OSM07045.1
Putative adenylate/guanylate cyclase; Identified by sequence similarity; putative.
  
  
  0.476
OSM01575.1
Putative serine threonine rich antigen; Identified by sequence similarity; putative.
       0.447
OSM01858.1
Putative peptidase M23B; Identified by sequence similarity; putative.
  
     0.444
Your Current Organism:
Magnetofaba australis
NCBI taxonomy Id: 1434232
Other names: M. australis IT-1, Magnetococcaceae bacterium IT-1, Magnetofaba australis IT-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.