STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000566685_03052Unannotated protein. (543 aa)    
Predicted Functional Partners:
GCA_000566685_03051
Unannotated protein.
       0.773
GCA_000566685_03053
Unannotated protein.
       0.773
GCA_000566685_03054
Unannotated protein.
       0.773
GCA_000566685_03055
Unannotated protein.
       0.714
GCA_000566685_03056
Unannotated protein.
       0.641
GCA_000566685_03057
Unannotated protein.
       0.594
GCA_000566685_03058
Unannotated protein.
       0.586
GCA_000566685_00442
Unannotated protein.
  
 
  0.513
GCA_000566685_02539
Unannotated protein.
  
  
  0.485
GCA_000566685_01268
Unannotated protein.
  
     0.418
Your Current Organism:
Dyadobacter tibetensis
NCBI taxonomy Id: 1434325
Other names: D. tibetensis Y620-1, Dyadobacter sp. Y620-1, Dyadobacter tibetensis Y620-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.