STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000566685_03272Unannotated protein. (496 aa)    
Predicted Functional Partners:
GCA_000566685_03273
Unannotated protein.
 
     0.939
GCA_000566685_04158
Unannotated protein.
  
     0.596
GCA_000566685_04159
Unannotated protein.
  
     0.523
GCA_000566685_03941
Unannotated protein.
 
     0.485
GCA_000566685_02696
Unannotated protein.
  
     0.477
GCA_000566685_01880
Unannotated protein.
  
 
   0.474
GCA_000566685_01187
Unannotated protein.
  
     0.452
GCA_000566685_03274
Unannotated protein.
       0.410
Your Current Organism:
Dyadobacter tibetensis
NCBI taxonomy Id: 1434325
Other names: D. tibetensis Y620-1, Dyadobacter sp. Y620-1, Dyadobacter tibetensis Y620-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.