STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC37292.1Transcriptional regulator. (96 aa)    
Predicted Functional Partners:
SMC37305.1
Hypothetical protein.
 
     0.952
SMC37258.1
Hypothetical protein.
 
     0.799
SMC37267.1
Hypothetical protein.
       0.768
SMC37277.1
Hypothetical protein.
       0.768
SMC37242.1
Inner membrane protein.
 
     0.714
SMC37251.1
Hypothetical protein.
       0.615
SMC37324.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
     
 0.545
SMC37340.1
Hypothetical protein.
       0.543
SMC37351.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
    0.438
SMC66121.1
Signal transduction histidine kinase.
  
  
 0.432
Your Current Organism:
Moheibacter sediminis
NCBI taxonomy Id: 1434700
Other names: CGMCC 1.12708, Empedobacter sp. M0116, JCM 19634, M. sediminis, Moheibacter sediminis Zhang et al. 2014, strain M0116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.