STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC61025.1Histidine kinase. (986 aa)    
Predicted Functional Partners:
SMC61014.1
Two component transcriptional regulator, LytTR family.
 
  0.971
SMC41257.1
Two component transcriptional regulator, LytTR family.
  
  0.872
SMC76815.1
Two component transcriptional regulator, LytTR family.
  
  0.872
SMC80364.1
Two component transcriptional regulator, LytTR family.
  
  0.872
SMC43433.1
Two component transcriptional regulator, LytTR family.
  
  0.871
SMC66216.1
Two component transcriptional regulator, LytTR family.
  
  0.871
SMC88853.1
Two component transcriptional regulator, LytTR family.
  
  0.871
SMC35795.1
Two component transcriptional regulator, LytTR family.
  
  0.870
SMC45917.1
Two component transcriptional regulator, LytTR family.
  
  0.870
SMC61001.1
Mannan endo-1,4-beta-mannosidase.
 
     0.746
Your Current Organism:
Moheibacter sediminis
NCBI taxonomy Id: 1434700
Other names: CGMCC 1.12708, Empedobacter sp. M0116, JCM 19634, M. sediminis, Moheibacter sediminis Zhang et al. 2014, strain M0116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.