STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMC61330.1Glycosyl transferase family 2. (279 aa)    
Predicted Functional Partners:
SMC61393.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.932
SMC61373.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.840
SMC61432.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.800
SMC41083.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.773
SMC61347.1
Glycosyltransferase involved in cell wall bisynthesis.
    
  0.771
SMC61363.1
Peptidoglycan/LPS O-acetylase OafA/YrhL, contains acyltransferase and SGNH-hydrolase domains.
       0.768
SMC61408.1
Glycosyltransferase, GT2 family.
    
  0.753
SMC40750.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.735
SMC61447.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.730
SMC61463.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.727
Your Current Organism:
Moheibacter sediminis
NCBI taxonomy Id: 1434700
Other names: CGMCC 1.12708, Empedobacter sp. M0116, JCM 19634, M. sediminis, Moheibacter sediminis Zhang et al. 2014, strain M0116
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.