rplQ protein (Moheibacter sediminis) - STRING interaction network

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Predicted Interactions

gene neighborhood

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textmining

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Score

rplQ

Large subunit ribosomal protein L17. (189 aa)

Predicted Functional Partners:

rpmI

0.999

rplT

0.999

rplY

0.999

rpsP

0.999

rsfS

0.999

rpmE2

0.999

rplM

0.999

rpsI

0.999

rpsB

0.999

rpsU

0.999

Your Current Organism:

Moheibacter sediminis

NCBI taxonomy Id: 1434700
Other names: CGMCC 1.12708, Empedobacter sp. M0116, JCM 19634, M. sediminis, Moheibacter sediminis Zhang et al. 2014, strain M0116

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplM	rplQ	SAMN06296427_103179	SAMN06296427_10586	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Large subunit ribosomal protein L17.	0.999
rplM	rplT	SAMN06296427_103179	SAMN06296427_101163	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplM	rplY	SAMN06296427_103179	SAMN06296427_101372	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.999
rplM	rpmE2	SAMN06296427_103179	SAMN06296427_10255	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L31P.	0.999
rplM	rpmI	SAMN06296427_103179	SAMN06296427_101162	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplM	rpsB	SAMN06296427_103179	SAMN06296427_103181	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplM	rpsI	SAMN06296427_103179	SAMN06296427_103180	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rplM	rpsP	SAMN06296427_103179	SAMN06296427_101415	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplM	rpsU	SAMN06296427_103179	SAMN06296427_103240	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.999
rplM	rsfS	SAMN06296427_103179	SAMN06296427_102260	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.999
rplQ	rplM	SAMN06296427_10586	SAMN06296427_103179	Large subunit ribosomal protein L17.	LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
rplQ	rplT	SAMN06296427_10586	SAMN06296427_101163	Large subunit ribosomal protein L17.	LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.999
rplQ	rplY	SAMN06296427_10586	SAMN06296427_101372	Large subunit ribosomal protein L17.	LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.	0.999
rplQ	rpmE2	SAMN06296427_10586	SAMN06296427_10255	Large subunit ribosomal protein L17.	LSU ribosomal protein L31P.	0.999
rplQ	rpmI	SAMN06296427_10586	SAMN06296427_101162	Large subunit ribosomal protein L17.	LSU ribosomal protein L35P; Belongs to the bacterial ribosomal protein bL35 family.	0.999
rplQ	rpsB	SAMN06296427_10586	SAMN06296427_103181	Large subunit ribosomal protein L17.	Small subunit ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.999
rplQ	rpsI	SAMN06296427_10586	SAMN06296427_103180	Large subunit ribosomal protein L17.	SSU ribosomal protein S9P; Belongs to the universal ribosomal protein uS9 family.	0.999
rplQ	rpsP	SAMN06296427_10586	SAMN06296427_101415	Large subunit ribosomal protein L17.	Small subunit ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.	0.999
rplQ	rpsU	SAMN06296427_10586	SAMN06296427_103240	Large subunit ribosomal protein L17.	Small subunit ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.999
rplQ	rsfS	SAMN06296427_10586	SAMN06296427_102260	Large subunit ribosomal protein L17.	Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.999