STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK50535.1Outer membrane receptor proteins, mostly Fe transport. (817 aa)    
Predicted Functional Partners:
SHK87993.1
Iron complex outermembrane recepter protein.
  
     0.493
SHL24518.1
GDSL-like Lipase/Acylhydrolase.
  
     0.475
SHL28886.1
Hypothetical protein.
  
     0.474
SHK85584.1
Starch-binding associating with outer membrane.
  
 
   0.466
SHL25679.1
SusD family protein.
  
 
   0.462
SHK74721.1
Outer membrane transport energization protein TonB.
    
   0.454
SHK98126.1
Hypothetical protein.
    
   0.454
SHL15508.1
Hypothetical protein.
    
   0.454
SHK92331.1
Protein of unknown function.
  
     0.453
SHL21153.1
Lipocalin-like domain-containing protein.
  
     0.444
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.