STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK78130.1Hypothetical protein. (447 aa)    
Predicted Functional Partners:
SHK78081.1
Hypothetical protein.
       0.473
SHK78111.1
TonB-dependent Receptor Plug Domain.
       0.473
SHK78057.1
Protein of unknown function.
       0.467
SHK78028.1
Hypothetical protein.
       0.456
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.429
SHK92815.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.424
SHL35341.1
HNH endonuclease.
    
   0.424
SHL37468.1
Thioredoxin-like.
    
   0.418
SHL67907.1
Hypothetical protein.
    
   0.418
SHL61869.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
    
  0.410
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.