STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK79567.1Gliding motility-associated lipoprotein GldJ. (542 aa)    
Predicted Functional Partners:
SHL23818.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.874
SHK79635.1
Hypothetical protein.
 
     0.872
SHK91264.1
Gliding motility associated protien GldN.
 
   
 0.869
SHK91314.1
Gliding motility-associated protein GldL.
 
   
 0.859
SHK91284.1
Gliding motility-associated protein GldM.
 
   
 0.856
SHK58424.1
Gliding-associated putative ABC transporter substrate-binding component GldG.
  
   
 0.854
SHK47671.1
Hypothetical protein.
  
   
 0.851
SHK47764.1
Cell surface protein SprA.
  
   
 0.851
SHL43638.1
Tetratricopeptide repeat-containing protein.
  
   
 0.849
SHK72777.1
Probable protein-translocating porin PorT.
  
   
 0.823
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.