STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHK88876.1Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (518 aa)    
Predicted Functional Partners:
SHL11733.1
L-proline dehydrogenase.
 
  
 0.788
SHL56321.1
Uncharacterized conserved protein YbbC, DUF1343 family.
     0.732
SHK88912.1
Hypothetical protein.
       0.714
SHK99220.1
BadF-type ATPase.
 
     0.629
recR
DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.602
SHL00388.1
Carbon starvation protein.
  
    0.602
SHL13684.1
CubicO group peptidase, beta-lactamase class C family.
     0.582
SHK88937.1
Hypothetical protein.
       0.538
SHK91484.1
Transcriptional regulator.
    
  0.535
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.507
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.