STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL21153.1Lipocalin-like domain-containing protein. (171 aa)    
Predicted Functional Partners:
SHL21135.1
Outer membrane protein OmpA.
 
     0.877
SHL22393.1
Protein of unknown function.
  
     0.675
SHL01185.1
N-Dimethylarginine dimethylaminohydrolase.
  
     0.672
SHL21615.1
Hypothetical protein.
  
     0.660
SHL21594.1
Hypothetical protein.
  
     0.617
SHL24518.1
GDSL-like Lipase/Acylhydrolase.
  
     0.606
SHK66303.1
Hypothetical protein.
  
     0.601
SHL21849.1
Protein of unknown function.
  
     0.585
SHK99085.1
Hypothetical protein.
  
     0.538
SHL45838.1
Glycosyl transferase family 2.
  
     0.530
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.