STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL56308.1Lipoprotein-releasing system permease protein. (409 aa)    
Predicted Functional Partners:
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
   
  0.966
SHL15071.1
Lipoprotein-releasing system permease protein.
  
  
  0.963
SHL72003.1
Putative ABC transport system ATP-binding protein.
   
  0.863
SHL74770.1
Putative ABC transport system ATP-binding protein.
   
  0.800
SHK92846.1
Hypothetical protein.
 
 
 
 0.777
SHL23559.1
Beta-barrel assembly machine subunit BamA.
  
     0.713
SHL56283.1
Cystathionine beta-synthase.
  
    0.704
SHL56256.1
Lipopolysaccharide export system ATP-binding protein.
 
     0.692
SHL42542.1
Hypothetical protein.
  
     0.657
SHL56321.1
Uncharacterized conserved protein YbbC, DUF1343 family.
       0.630
Your Current Organism:
Chishuiella changwenlii
NCBI taxonomy Id: 1434701
Other names: C. changwenlii, CGMCC 1.12707, Chishuiella changwenlii Zhang et al. 2014, DSM 27989, JCM 19633, Wautersiella sp. BY4, strain BY4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.