STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001730525_01225Unannotated protein. (310 aa)    
Predicted Functional Partners:
GCA_001730525_01226
Unannotated protein.
 
    0.939
GCA_001730525_01224
Unannotated protein.
 
    0.877
GCA_001730525_02752
Unannotated protein.
  
     0.669
GCA_001730525_00416
Unannotated protein.
  
     0.668
GCA_001730525_01227
Unannotated protein.
       0.602
GCA_001730525_01228
Unannotated protein.
       0.602
GCA_001730525_01417
Unannotated protein.
  
     0.588
GCA_001730525_01229
Unannotated protein.
 
     0.583
GCA_001730525_01539
Unannotated protein.
  
     0.514
GCA_001730525_03317
Unannotated protein.
  
     0.509
Your Current Organism:
Arcticibacter eurypsychrophilus
NCBI taxonomy Id: 1434752
Other names: A. eurypsychrophilus, Arcticibacter eurypsychrophilus Shen et al. 2015, Arcticibacter sp. MJ9-5, JCM 19862, KCTC 42008, Pedobacter sp. MJ9-5, strain MJ9-5
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.