STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001547935_00548Unannotated protein. (588 aa)    
Predicted Functional Partners:
GCA_001547935_00553
Unannotated protein.
 0.998
GCA_001547935_00547
Unannotated protein.
 
 0.995
GCA_001547935_02266
Unannotated protein.
 0.995
GCA_001547935_00556
Unannotated protein.
 
 0.994
GCA_001547935_00549
Unannotated protein.
  
 0.991
GCA_001547935_00557
Unannotated protein.
 
 0.984
GCA_001547935_02892
Unannotated protein.
 
 0.973
GCA_001547935_02621
Unannotated protein.
 
 
0.962
GCA_001547935_00550
Unannotated protein.
 
  
 0.961
GCA_001547935_00555
Unannotated protein.
 
 
 0.950
Your Current Organism:
Vibrio tritonius
NCBI taxonomy Id: 1435069
Other names: JCM 16456, LMG 25401, LMG:25401, V. tritonius, Vibrio sp. AM2, Vibrio sp. MA12, Vibrio sp. MA17, Vibrio sp. MA35, Vibrio tritonius Sawabe et al. 2015, strain am2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.