STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJD35891.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (124 aa)    
Predicted Functional Partners:
KJD36022.1
methionyl-tRNA formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.745
KJD32761.1
acyl-CoA reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.679
KJD36543.1
uroporphyrinogen-III synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.676
KJD36867.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.651
KJD36868.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.647
KJD35484.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.644
KJD32410.1
S-adenosyl-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.610
KJD31855.1
Gliding motility protein GldB; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.595
KJD35890.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.586
KJD34234.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.583
Your Current Organism:
Tamlana sedimentorum
NCBI taxonomy Id: 1435349
Other names: JCM 19808, KMM 9545, NRIC 0921, T. sedimentorum, Tamlana sedimentorum Romanenko et al. 2014 emend. Hahnke et al. 2016, Tamlana sp. KMM 9545
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.