Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
MED17 | parPi_0000160 | A0A402EYT8 | A0A402E640 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RPOL4c domain-containing protein. | 0.996 |
MED17 | parPi_0004982 | A0A402EYT8 | A0A402EMM0 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RNA_pol_L_2 domain-containing protein. | 0.986 |
MED17 | parPi_0005499 | A0A402EYT8 | A0A402ENW1 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | RPOLD domain-containing protein. | 0.993 |
MED17 | parPi_0005792 | A0A402EYT8 | A0A402EPF4 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | S1 domain-containing protein. | 0.993 |
MED17 | parPi_0006743 | A0A402EYT8 | A0A402ERV4 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.972 |
MED17 | parPi_0018903 | A0A402EYT8 | A0A402FIV5 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.967 |
MED17 | parPi_0026830 | A0A402EYT8 | A0A402E8G9 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.878 |
MED17 | parPi_0028021 | A0A402EYT8 | A0A402G021 | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Uncharacterized protein. | 0.975 |
parPi_0000160 | MED17 | A0A402E640 | A0A402EYT8 | RPOL4c domain-containing protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.996 |
parPi_0000160 | parPi_0004982 | A0A402E640 | A0A402EMM0 | RPOL4c domain-containing protein. | RNA_pol_L_2 domain-containing protein. | 0.999 |
parPi_0000160 | parPi_0005499 | A0A402E640 | A0A402ENW1 | RPOL4c domain-containing protein. | RPOLD domain-containing protein. | 0.999 |
parPi_0000160 | parPi_0005792 | A0A402E640 | A0A402EPF4 | RPOL4c domain-containing protein. | S1 domain-containing protein. | 0.999 |
parPi_0000160 | parPi_0006743 | A0A402E640 | A0A402ERV4 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.999 |
parPi_0000160 | parPi_0014885 | A0A402E640 | A0A402F9I6 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.998 |
parPi_0000160 | parPi_0018903 | A0A402E640 | A0A402FIV5 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.999 |
parPi_0000160 | parPi_0026830 | A0A402E640 | A0A402E8G9 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.891 |
parPi_0000160 | parPi_0028021 | A0A402E640 | A0A402G021 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.999 |
parPi_0000160 | parPi_0028959 | A0A402E640 | A0A402FZ92 | RPOL4c domain-containing protein. | Uncharacterized protein. | 0.998 |
parPi_0004982 | MED17 | A0A402EMM0 | A0A402EYT8 | RNA_pol_L_2 domain-containing protein. | Mediator of RNA polymerase II transcription subunit 17; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.986 |
parPi_0004982 | parPi_0000160 | A0A402EMM0 | A0A402E640 | RNA_pol_L_2 domain-containing protein. | RPOL4c domain-containing protein. | 0.999 |
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