STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0027855Uncharacterized protein. (61 aa)    
Predicted Functional Partners:
parPi_0011428
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.996
parPi_0013644
Uncharacterized protein.
    
 0.996
parPi_0011430
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.995
parPi_0010401
WW domain-containing protein.
    
 0.994
parPi_0018234
HMG box domain-containing protein.
    
 0.994
parPi_0001892
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.989
parPi_0015148
Uncharacterized protein.
   
 0.987
parPi_0020777
Fanconi-associated nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
   
 0.983
parPi_0016231
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.979
parPi_0020272
Uncharacterized protein; Belongs to the peptidase C1 family.
  
 0.974
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.