STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0001787Uncharacterized protein. (255 aa)    
Predicted Functional Partners:
parPi_0015624
Uncharacterized protein.
   
 
 0.684
parPi_0014093
Uncharacterized protein.
   
 
 0.605
parPi_0015151
Uncharacterized protein.
   
 
 0.605
parPi_0015724
Uncharacterized protein.
      
 0.570
parPi_0015775
Uncharacterized protein.
      
 0.569
parPi_0016751
Uncharacterized protein.
      
 0.568
parPi_0002794
Serine/threonine-protein kinase RIO3; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
      
 0.567
parPi_0007910
RGS domain-containing protein.
    
 
 0.521
parPi_0007911
RGS domain-containing protein.
    
 
 0.521
parPi_0017893
RGS domain-containing protein.
   
 
 0.505
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.