STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0001951Uncharacterized protein. (80 aa)    
Predicted Functional Partners:
parPi_0000589
Uncharacterized protein.
   
 0.999
parPi_0001597
TRASH domain-containing protein.
  
 0.999
parPi_0001900
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
  
 0.999
parPi_0004590
Ribosomal_L7Ae domain-containing protein.
   
 0.999
parPi_0012148
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
   
 0.999
parPi_0013578
Radical S-adenosyl methionine domain-containing protein; May be a heme chaperone, appears to bind heme. Homologous bacterial proteins do not have oxygen-independent coproporphyrinogen- III oxidase activity. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L- methionine; Belongs to the anaerobic coproporphyrinogen-III oxidase family.
  
 0.999
parPi_0017048
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.999
parPi_0017330
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
parPi_0018423
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 0.999
parPi_0023320
Uncharacterized protein.
   
 0.999
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.