STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0004111PRT_C domain-containing protein. (122 aa)    
Predicted Functional Partners:
parPi_0004110
Uncharacterized protein.
 
      0.819
parPi_0004109
C2 domain-containing protein.
 
      0.775
parPi_0016645
Uncharacterized protein.
     
 0.700
parPi_0012410
RNA binding protein fox-1 homolog; RNA-binding protein that regulates alternative splicing events.
      
 0.568
parPi_0009087
Uncharacterized protein; Belongs to the Stoned B family.
     
 0.487
parPi_0014544
Uncharacterized protein.
     
 0.474
parPi_0011267
Ubiquitin-like domain-containing protein.
    
 0.469
parPi_0017777
Proteasome subunit beta.
      
 0.459
parPi_0014760
MFS domain-containing protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
     
 0.457
parPi_0021325
AP-2 complex subunit alpha; Component of the adaptor protein complex 2 (AP-2). Adaptor protein complexes function in protein transport via transport vesicles in different membrane traffic pathways. Adaptor protein complexes are vesicle coat components and appear to be involved in cargo selection and vesicle formation. AP-2 is involved in clathrin-dependent endocytosis in which cargo proteins are incorporated into vesicles surrounded by clathrin (clathrin-coated vesicles, CCVs) which are destined for fusion with the early endosome. The clathrin lattice serves as a mechanical scaffold bu [...]
    
  0.446
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.