STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0004850Bleomycin hydrolase; Belongs to the peptidase C1 family. (455 aa)    
Predicted Functional Partners:
parPi_0003371
Nudix hydrolase domain-containing protein.
    
   0.769
parPi_0015373
Aminopeptidase.
    
 0.595
TSFM
Elongation factor Ts, mitochondrial; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.
     
 0.572
parPi_0017543
LRRNT domain-containing protein.
    
   0.570
parPi_0019055
ANK_REP_REGION domain-containing protein.
     
 0.570
parPi_0015871
Uncharacterized protein.
      
 0.568
parPi_0004839
TPR_REGION domain-containing protein.
    
 
 0.567
parPi_0012078
CH_2 domain-containing protein.
      
 0.567
parPi_0000833
Aminopeptidase.
 
  
 0.516
parPi_0023858
Peptidyl-prolyl cis-trans isomerase.
     
 0.514
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.