STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0005579PHD-type domain-containing protein. (388 aa)    
Predicted Functional Partners:
parPi_0007205
Uncharacterized protein.
   
 0.945
parPi_0018337
BCL9 domain-containing protein.
    
 0.916
parPi_0006050
Uncharacterized protein.
    
 0.891
parPi_0013825
Uncharacterized protein.
    
 0.817
parPi_0007306
UEV domain-containing protein.
    
  0.800
parPi_0005204
Uncharacterized protein.
    
 0.794
parPi_0002109
Uncharacterized protein.
    
 0.777
parPi_0034228
Uncharacterized protein.
    
 0.777
parPi_0008181
Uncharacterized protein; Belongs to the actin family.
    
 0.773
parPi_0017979
Uncharacterized protein; Belongs to the actin family.
    
 0.773
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.