STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0005629Uncharacterized protein. (3024 aa)    
Predicted Functional Partners:
parPi_0016198
Uncharacterized protein.
   
 
0.971
parPi_0020263
MRG domain-containing protein.
   
 
 0.963
parPi_0002277
SET domain-containing protein.
   
0.935
parPi_0016950
Uncharacterized protein.
   
0.890
parPi_0028831
Bromo domain-containing protein.
   
 0.890
parPi_0009512
Uncharacterized protein.
   
 0.886
parPi_0024137
Histone-lysine N-methyltransferase, H3 lysine-79 specific.
    
 0.879
parPi_0019180
Uncharacterized protein.
    
 0.872
parPi_0032408
Uncharacterized protein.
    
 0.872
parPi_0008199
SET domain-containing protein.
   
 
 0.870
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.