STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0007416Uncharacterized protein. (372 aa)    
Predicted Functional Partners:
parPi_0020402
Uncharacterized protein.
   
 0.996
parPi_0000163
LIM domain-containing protein.
   
 0.983
parPi_0000547
LIM domain-containing protein.
   
 0.983
parPi_0002247
Uncharacterized protein; Belongs to the paxillin family.
   
 0.969
parPi_0005296
Integrin beta; Belongs to the integrin beta chain family.
   
 0.935
parPi_0008003
Integrin beta; Belongs to the integrin beta chain family.
   
 0.933
parPi_0015781
Integrin beta; Belongs to the integrin beta chain family.
   
 0.933
parPi_0027601
Uncharacterized protein.
   
 0.932
parPi_0008317
Uncharacterized protein.
   
 0.932
parPi_0015033
Integrin beta; Belongs to the integrin beta chain family.
   
 0.924
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.