Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
parPi_0004732 | parPi_0008046 | A0A402EM17 | A0A402EUM0 | HATPase_c domain-containing protein. | Nuclear receptor domain-containing protein. | 0.659 |
parPi_0004838 | parPi_0008046 | A0A402EM85 | A0A402EUM0 | SANT domain-containing protein. | Nuclear receptor domain-containing protein. | 0.621 |
parPi_0004838 | parPi_0017052 | A0A402EM85 | A0A402FEQ1 | SANT domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.500 |
parPi_0008046 | parPi_0004732 | A0A402EUM0 | A0A402EM17 | Nuclear receptor domain-containing protein. | HATPase_c domain-containing protein. | 0.659 |
parPi_0008046 | parPi_0004838 | A0A402EUM0 | A0A402EM85 | Nuclear receptor domain-containing protein. | SANT domain-containing protein. | 0.621 |
parPi_0008046 | parPi_0012969 | A0A402EUM0 | A0A402F548 | Nuclear receptor domain-containing protein. | RRM domain-containing protein. | 0.709 |
parPi_0008046 | parPi_0014315 | A0A402EUM0 | A0A402F8C4 | Nuclear receptor domain-containing protein. | Uncharacterized protein. | 0.621 |
parPi_0008046 | parPi_0014317 | A0A402EUM0 | A0A402F8C3 | Nuclear receptor domain-containing protein. | Uncharacterized protein. | 0.621 |
parPi_0008046 | parPi_0014346 | A0A402EUM0 | A0A402F8E6 | Nuclear receptor domain-containing protein. | RRM domain-containing protein. | 0.869 |
parPi_0008046 | parPi_0017052 | A0A402EUM0 | A0A402FEQ1 | Nuclear receptor domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.715 |
parPi_0008046 | parPi_0022828 | A0A402EUM0 | A0A402FT02 | Nuclear receptor domain-containing protein. | Uncharacterized protein. | 0.831 |
parPi_0008046 | parPi_0026750 | A0A402EUM0 | A0A402EIC0 | Nuclear receptor domain-containing protein. | SANT domain-containing protein. | 0.621 |
parPi_0008046 | parPi_0027052 | A0A402EUM0 | A0A402EHZ6 | Nuclear receptor domain-containing protein. | GPS2_interact domain-containing protein. | 0.621 |
parPi_0012969 | parPi_0008046 | A0A402F548 | A0A402EUM0 | RRM domain-containing protein. | Nuclear receptor domain-containing protein. | 0.709 |
parPi_0012969 | parPi_0014346 | A0A402F548 | A0A402F8E6 | RRM domain-containing protein. | RRM domain-containing protein. | 0.402 |
parPi_0012969 | parPi_0017052 | A0A402F548 | A0A402FEQ1 | RRM domain-containing protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.914 |
parPi_0014315 | parPi_0008046 | A0A402F8C4 | A0A402EUM0 | Uncharacterized protein. | Nuclear receptor domain-containing protein. | 0.621 |
parPi_0014315 | parPi_0014317 | A0A402F8C4 | A0A402F8C3 | Uncharacterized protein. | Uncharacterized protein. | 0.888 |
parPi_0014315 | parPi_0017052 | A0A402F8C4 | A0A402FEQ1 | Uncharacterized protein. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.500 |
parPi_0014317 | parPi_0008046 | A0A402F8C3 | A0A402EUM0 | Uncharacterized protein. | Nuclear receptor domain-containing protein. | 0.621 |
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