STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0008046Nuclear receptor domain-containing protein. (200 aa)    
Predicted Functional Partners:
parPi_0014346
RRM domain-containing protein.
   
 0.869
parPi_0022828
Uncharacterized protein.
    
 0.831
parPi_0017052
Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
    
  0.715
parPi_0012969
RRM domain-containing protein.
    
 0.709
parPi_0004732
HATPase_c domain-containing protein.
   
 0.659
parPi_0027052
GPS2_interact domain-containing protein.
    
 0.621
parPi_0026750
SANT domain-containing protein.
    
 0.621
parPi_0004838
SANT domain-containing protein.
    
 0.621
parPi_0014317
Uncharacterized protein.
    
 0.621
parPi_0014315
Uncharacterized protein.
    
 0.621
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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