STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0009128Uncharacterized protein. (830 aa)    
Predicted Functional Partners:
parPi_0006351
AP-1 complex subunit gamma.
    
 
 0.631
parPi_0014856
PKS_ER domain-containing protein.
   
  
 0.592
parPi_0003647
R3H domain-containing protein.
      
 0.588
parPi_0011700
Uncharacterized protein.
    
 
 0.582
parPi_0001388
RNA helicase.
    
 
 0.571
parPi_0013784
RNA helicase.
    
 
 0.571
parPi_0014303
RNA helicase.
    
 
 0.571
parPi_0017334
PX domain-containing protein.
      
 0.569
parPi_0021662
Uncharacterized protein.
      
 0.569
parPi_0000935
RING-type domain-containing protein.
      
 0.568
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.