STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0009299Autophagy protein 5; Involved in autophagic vesicle formation. (203 aa)    
Predicted Functional Partners:
parPi_0016581
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in autophagic vesicle formation; Belongs to the ATG12 family.
   
 0.999
parPi_0000172
WD_REPEATS_REGION domain-containing protein.
   
 0.998
parPi_0001552
Autophagy-related protein 3.
   
 0.998
parPi_0024649
Uncharacterized protein.
   
 0.997
parPi_0006344
Uncharacterized protein.
   
 0.976
parPi_0018018
Uncharacterized protein.
   
 0.973
parPi_0027427
ThiF domain-containing protein.
    
 0.969
parPi_0021919
Uncharacterized protein.
    
 0.969
parPi_0007556
Uncharacterized protein.
    
 0.934
parPi_0014776
Uncharacterized protein.
    
 0.925
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.