STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0012015HMG box domain-containing protein. (938 aa)    
Predicted Functional Partners:
parPi_0006352
AXH domain-containing protein.
    
 
 0.577
parPi_0009418
AXH domain-containing protein.
    
 
 0.577
parPi_0024630
Uncharacterized protein.
    
 
 0.573
parPi_0012776
Uncharacterized protein.
      
 0.568
parPi_0013922
Uncharacterized protein.
    
 0.533
parPi_0032867
Uncharacterized protein.
   
  0.527
parPi_0015052
CYTOSOL_AP domain-containing protein.
      
 0.521
parPi_0025841
Uncharacterized protein.
    
  0.509
parPi_0026846
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.509
parPi_0001272
Uncharacterized protein.
    
  0.509
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.