Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
parPi_0000661 | parPi_0012807 | A0A402E7L0 | A0A402F4S1 | Uncharacterized protein. | Cytochrome b5 heme-binding domain-containing protein. | 0.437 |
parPi_0000661 | parPi_0019261 | A0A402E7L0 | A0A402FJL3 | Uncharacterized protein. | Uncharacterized protein. | 0.755 |
parPi_0000661 | parPi_0025721 | A0A402E7L0 | A0A402E7E6 | Uncharacterized protein. | PALB2_WD40 domain-containing protein. | 0.417 |
parPi_0000661 | parPi_0027341 | A0A402E7L0 | A0A402E7X7 | Uncharacterized protein. | Methyltransf_2 domain-containing protein. | 0.931 |
parPi_0000661 | parPi_0028978 | A0A402E7L0 | A0A402FZH0 | Uncharacterized protein. | Carrier domain-containing protein. | 0.574 |
parPi_0003140 | parPi_0019261 | A0A402EHU9 | A0A402FJL3 | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | Uncharacterized protein. | 0.631 |
parPi_0003140 | parPi_0025721 | A0A402EHU9 | A0A402E7E6 | Nibrin; Component of the MRE11-RAD50-NBN (MRN complex) which plays a critical role in the cellular response to DNA damage and the maintenance of chromosome integrity. The complex is involved in double- strand break (DSB) repair, DNA recombination, maintenance of telomere integrity, cell cycle checkpoint control and meiosis. | PALB2_WD40 domain-containing protein. | 0.740 |
parPi_0007899 | parPi_0019261 | A0A402EUC9 | A0A402FJL3 | Phospholipase A2. | Uncharacterized protein. | 0.615 |
parPi_0008545 | parPi_0010361 | A0A402EVK5 | A0A402EZK1 | AB hydrolase-1 domain-containing protein. | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | 0.691 |
parPi_0008545 | parPi_0014572 | A0A402EVK5 | A0A402F8U7 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.837 |
parPi_0008545 | parPi_0019261 | A0A402EVK5 | A0A402FJL3 | AB hydrolase-1 domain-containing protein. | Uncharacterized protein. | 0.744 |
parPi_0008545 | parPi_0025721 | A0A402EVK5 | A0A402E7E6 | AB hydrolase-1 domain-containing protein. | PALB2_WD40 domain-containing protein. | 0.910 |
parPi_0008545 | parPi_0028978 | A0A402EVK5 | A0A402FZH0 | AB hydrolase-1 domain-containing protein. | Carrier domain-containing protein. | 0.809 |
parPi_0010361 | parPi_0008545 | A0A402EZK1 | A0A402EVK5 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | AB hydrolase-1 domain-containing protein. | 0.691 |
parPi_0010361 | parPi_0014572 | A0A402EZK1 | A0A402F8U7 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Uncharacterized protein. | 0.587 |
parPi_0010361 | parPi_0019261 | A0A402EZK1 | A0A402FJL3 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Uncharacterized protein. | 0.631 |
parPi_0010361 | parPi_0025721 | A0A402EZK1 | A0A402E7E6 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | PALB2_WD40 domain-containing protein. | 0.568 |
parPi_0010361 | parPi_0028978 | A0A402EZK1 | A0A402FZH0 | Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family. | Carrier domain-containing protein. | 0.618 |
parPi_0012807 | parPi_0000661 | A0A402F4S1 | A0A402E7L0 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.437 |
parPi_0012807 | parPi_0014572 | A0A402F4S1 | A0A402F8U7 | Cytochrome b5 heme-binding domain-containing protein. | Uncharacterized protein. | 0.960 |
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