STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0020200IF rod domain-containing protein; Belongs to the intermediate filament family. (855 aa)    
Predicted Functional Partners:
parPi_0018100
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
  0.592
parPi_0018099
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
  0.590
parPi_0018094
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
0.587
parPi_0018101
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
 
0.549
parPi_0020198
IF rod domain-containing protein; Belongs to the intermediate filament family.
   
 
0.544
parPi_0018103
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
 
0.538
parPi_0018104
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
 
0.534
parPi_0020197
IF rod domain-containing protein; Belongs to the intermediate filament family.
  
 
 
0.522
parPi_0026649
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
  0.488
parPi_0016700
IF rod domain-containing protein; Belongs to the intermediate filament family.
    
 
0.488
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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