STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0022171Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (376 aa)    
Predicted Functional Partners:
parPi_0004321
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
   
 
 0.935
parPi_0003586
Histone H2A; Belongs to the histone H2A family.
   
 
 0.931
parPi_0010720
Histone H2A; Belongs to the histone H2A family.
   
 
 0.931
parPi_0007622
Protein SDA1; Required for 60S pre-ribosomal subunits export to the cytoplasm; Belongs to the SDA1 family.
    
 
 0.906
parPi_0001951
Uncharacterized protein.
   
 
 0.753
parPi_0015236
Uncharacterized protein.
   
 
 0.753
parPi_0013875
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 
 0.735
parPi_0005110
Uncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family.
  
 
0.703
EIF3E
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.662
parPi_0001229
Glyco_18 domain-containing protein; Belongs to the glycosyl hydrolase 18 family.
   
 
 0.654
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.