STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
parPi_0025473CCHC-type domain-containing protein. (427 aa)    
Predicted Functional Partners:
parPi_0026927
Uncharacterized protein.
    
  0.687
parPi_0024862
Uncharacterized protein.
    
  0.687
parPi_0033847
Helicase ATP-binding domain-containing protein.
    
  0.687
parPi_0016100
DIRP domain-containing protein.
    
 0.537
parPi_0010422
Uncharacterized protein.
    
  0.526
parPi_0024197
Retrotrans_gag domain-containing protein.
  
     0.511
parPi_0030487
Retrotrans_gag domain-containing protein.
  
     0.503
parPi_0001795
Uncharacterized protein.
    
  0.474
parPi_0005543
Uncharacterized protein.
    
  0.474
parPi_0006683
Uncharacterized protein.
    
  0.474
Your Current Organism:
Paroedura picta
NCBI taxonomy Id: 143630
Other names: P. picta, ZMB 4798
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.